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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3150594_3152462_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3150594 - 3152462

Intron Length:

1869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

CACGTCTCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

CGGCTCTGACCT

Flanking Amino Acid:

TSLVSALDSMCSALSKLNAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

38.4

Major BPS

69.1

0.47

60.7

37.6

Major PPT

68.1

0.41

0.9

61.3

34.7

Minor 5ss

30.9

-2.2

3.3

38.6

Minor BPS

-0.2

1.7

58.42

44.4

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044340

3113562 - 3152585

39024

ENSAPLT00000007184

3114176 - 3152585

38410