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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3185689_3186179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3185689 - 3186179

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

ATGTCCTCACCT

Flanking Amino Acid:

LISQELLKKERSLNELRALL

Intron Amino Acid Position:

901

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

1.2

76.2

39.9

Major BPS

72.4

0.56

73.5

32.5

Major PPT

81.2

0.7

0.8

72.9

37.4

Minor 5ss

31.7

-2.1

3.1

40.6

45.6

Minor BPS

60.5

0.41

1.9

78.7

43.4

Associated Gene:

Gene:

CLIP2

Ensembl Gene ID:

ENSAPLG00000010136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010575

3180972 - 3240248

59277