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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3186337_3186748_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3186337 - 3186748

Intron Length:

412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTCTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAGCAA

U12 Branch Point Sequence:

CTCCCCATATCC

Flanking Amino Acid:

QTETLRAQVSALENKCKIAE

Intron Amino Acid Position:

849

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

27.9

Major BPS

48.5

-0

1.4

38.9

Major PPT

74.4

0.55

0.8

73.1

31.8

Minor 5ss

44.9

-0.5

2.8

58.5

40.5

Minor BPS

48.4

-0.1

1.9

60.62

44.4

Associated Gene:

Gene:

CLIP2

Ensembl Gene ID:

ENSAPLG00000010136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010575

3180972 - 3240248

59277