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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3198793_3201183_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3198793 - 3201183

Intron Length:

2391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAACAG

5'SS Class:

major

3'SS Sequence:

TCCCCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGTCACTGATCA

Flanking Amino Acid:

ELLNQLEEEKRKVEDLQFRV

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

64.9

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

76.1

0.59

0.7

68.3

31.9

Minor 5ss

30.7

-2.2

3.1

38.3

46.6

Minor BPS

48.3

-0.1

1.9

64.27

41.1

Associated Gene:

Gene:

CLIP2

Ensembl Gene ID:

ENSAPLG00000010136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010575

3180972 - 3240248

59277