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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3278536_3279129_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3278536 - 3279129

Intron Length:

594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGCCT

5'SS Class:

major

3'SS Sequence:

TTTACTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TTTACTTCTACA

Flanking Amino Acid:

PAAGGHYELPWVEKYRPMKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

64.8

40.7

Major BPS

68.8

0.47

1.2

63.4

Major PPT

86.2

0.81

0.7

80.5

31.4

Minor 5ss

28.1

-2.5

3.3

36.8

41.4

Minor BPS

54.5

0.13

1.9

72.49

39.1

Associated Gene:

Gene:

RFC2

Ensembl Gene ID:

ENSAPLG00000009389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009836

3278429 - 3284978

6550