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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3279893_3280281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3279893 - 3280281

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

GTTGCATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

TTATCAGAAATT

Flanking Amino Acid:

EGNVPNIIIAGPPGTGKTTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

72.2

0.5

0.9

62.8

43.3

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

46.5

-0.1

2.4

73.75

43.3

Associated Gene:

Gene:

RFC2

Ensembl Gene ID:

ENSAPLG00000009389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009836

3278429 - 3284978

6550