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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3282291_3282735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3282291 - 3282735

Intron Length:

445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

AATAGTTCAAAT

Flanking Amino Acid:

LACNASDKIIEPIQSRCAVL

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

73.9

Major BPS

77.3

0.68

81.5

Major PPT

78.7

0.65

0.8

76.5

32.1

Minor 5ss

37.1

-1.5

3.3

50.2

46.4

Minor BPS

44.9

-0.3

62.14

41.4

Associated Gene:

Gene:

RFC2

Ensembl Gene ID:

ENSAPLG00000009389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009836

3278429 - 3284978

6550