Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_3312975_3313083_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3312975 - 3313083

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

CTTTATTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CTTTATTTAACA

Flanking Amino Acid:

LKEALTYDGALLGDRSLRVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

74.8

35.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

80.9

0.69

0.9

35.7

Minor 5ss

38.2

-1.3

2.7

49.5

40.3

Minor BPS

73.2

0.72

1.4

80.03

36.1

Associated Gene:

Gene:

EIF4H

Ensembl Gene ID:

ENSAPLG00000009166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023358

3309891 - 3315853

5963

ENSAPLT00000009559

3309891 - 3315853

5963