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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3333292_3333695_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3333292 - 3333695

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TGTGATTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

TGTGATTGAACA

Flanking Amino Acid:

LLLMAIHLFKNPSETMDLLS

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

27.2

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

63.3

0.3

1.1

58.2

46.1

Minor 5ss

40.6

-1.1

3.1

57.4

46.8

Minor BPS

51.9

0.06

1.7

66.01

40.1

Associated Gene:

Gene:

MYBBP1A

Ensembl Gene ID:

ENSAPLG00000008534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008925

3329408 - 3381657

52250