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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3338508_3339313_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3338508 - 3339313

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

AATGCTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

TTGTTCTCAATG

Flanking Amino Acid:

DFLQKTALIFTNSLCRAKQY

Intron Amino Acid Position:

586

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

1.3

79.6

34.4

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

75.2

0.57

0.9

70.5

40.2

Minor 5ss

38.6

-1.3

3.3

51.8

38.6

Minor BPS

0.27

1.6

66.93

41.4

Associated Gene:

Gene:

MYBBP1A

Ensembl Gene ID:

ENSAPLG00000008534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008925

3329408 - 3381657

52250