Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_3339449_3340701_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3339449 - 3340701

Intron Length:

1253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTCTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTCTTTTTATTT

Flanking Amino Acid:

TDSSVALYYFSASLYLLKVL

Intron Amino Acid Position:

631

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.2

0.79

0.7

85.1

29.3

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

56.7

0.29

1.6

70.13

42.3

Associated Gene:

Gene:

MYBBP1A

Ensembl Gene ID:

ENSAPLG00000008534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008925

3329408 - 3381657

52250