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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3340811_3342804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3340811 - 3342804

Intron Length:

1994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGGAAAT

U12 Branch Point Sequence:

TTTTTCCCCATA

Flanking Amino Acid:

QKNAIPQACQVSSTGCLDVE

Intron Amino Acid Position:

668

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

43.8

-0.3

1.4

44.7

45.2

Major PPT

81.8

0.72

0.7

77.6

24.5

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

46.3

-0.3

2.2

67.7

39.2

Associated Gene:

Gene:

MYBBP1A

Ensembl Gene ID:

ENSAPLG00000008534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008925

3329408 - 3381657

52250