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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3342937_3344794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3342937 - 3344794

Intron Length:

1858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TTCTTTGTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

AAACCACTAATA

Flanking Amino Acid:

MFLDLFTRFPIMCKPLVDTL

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

83.8

0.76

0.8

79.8

32.4

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

46.5

-0.2

1.8

56.16

35.6

Associated Gene:

Gene:

MYBBP1A

Ensembl Gene ID:

ENSAPLG00000008534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008925

3329408 - 3381657

52250