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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3344864_3366933_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3344864 - 3366933

Intron Length:

22070

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

CGCGGTTTCACG

Flanking Amino Acid:

ITAGARQHQQAQACLLLQKV

Intron Amino Acid Position:

735

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

90.4

0.91

0.6

88.5

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

39.7

-0.9

2.2

38.47

45.3

Associated Gene:

Gene:

MYBBP1A

Ensembl Gene ID:

ENSAPLG00000008534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008925

3329408 - 3381657

52250