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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3498862_3533225_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3498862 - 3533225

Intron Length:

34364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAG

U12 Branch Point Sequence:

AGGTATTGAGTT

Flanking Amino Acid:

LNYLDRYTVAGVLLDIQQHF

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

71.8

33.2

Major BPS

64.6

0.36

1.5

63.4

44.3

Major PPT

83.3

0.75

0.8

77.1

31.6

Minor 5ss

24.1

-3

3.2

29.7

43.3

Minor BPS

44.1

-0.3

1.7

57.02

39.7

Associated Gene:

Gene:

SPNS2

Ensembl Gene ID:

ENSAPLG00000008372

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008691

3408850 - 3533675

124826