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Intron Name: Anas_platyrhynchos_platyrhynchos_20_357059_357363_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
357059 - 357363

Intron Length:
305

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGCAAA

5'SS Class:
strong_major

3'SS Sequence:
CTTTCAATGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAT

U12 Branch Point Sequence:
TCTTCTTTCAAT

Flanking Amino Acid:
NAKALFRCGQACLCMTEYKK

Intron Amino Acid Position:
258

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.2
0.74
1
74.1
38.3

Major BPS
88.7
0.96
0.8
78
36.5

Major PPT
71
0.47
1
66.8
38.2

Minor 5ss
37.3
-1.4
3.1
47.6
48.1

Minor BPS
62
0.46
1.9
80.63
41.5

Associated Gene:

Gene:
FKBP6

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

354221 - 362044
7824