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Intron Name: Anas_platyrhynchos_platyrhynchos_20_360874_361881_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
360874 - 361881

Intron Length:
1008

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCGCTC

5'SS Class:
major

3'SS Sequence:
TTGGGCTGTGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCTT

U12 Branch Point Sequence:
TTTCTCTTCTCC

Flanking Amino Acid:
QPAPPAATVAVKYSGYLEHA

Intron Amino Acid Position:
55

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.2
0.38
1.3
58.9
46

Major BPS
37.5
-0.7
4.3
79.6
35.6

Major PPT
68.2
0.41
1.1
61.7
44.4

Minor 5ss
39.8
-1.1
3.6
59.2
45.5

Minor BPS
43.3
-0.5
3.6
71.17
40.3

Associated Gene:

Gene:
FKBP6

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

354221 - 362044
7824