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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3614274_3616693_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3614274 - 3616693

Intron Length:

2420

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCACTGAGA

5'SS Class:

major

3'SS Sequence:

GGGAAATATGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

CCTTTCTGCACC

Flanking Amino Acid:

HETSCLKNPSAHESTGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.2

62.4

41.9

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

53.5

0.08

1.1

44.1

45.7

Minor 5ss

20.3

-3.4

3.9

31.5

42.3

Minor BPS

49.6

-0

1.9

62.1

43.7

Associated Gene:

Gene:

SPNS3

Ensembl Gene ID:

ENSAPLG00000008205

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008527

3586652 - 3616714

30063