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Intron Name: Anas_platyrhynchos_platyrhynchos_20_364863_365722_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

364863 - 365722

Intron Length:

860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGCAGG

5'SS Class:

major

3'SS Sequence:

ACTGTTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTTAC

U12 Branch Point Sequence:

CCGTCCTAGAGA

Flanking Amino Acid:

PISTTYCRMKEELSVLLTDV

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.3

55.7

48.6

Major BPS

48.4

-0.1

1.3

41.1

Major PPT

72.6

0.51

0.9

69.7

Minor 5ss

33.7

-1.9

40.4

45.4

Minor BPS

46.7

-0.2

53.22

45.8

Associated Gene:

Gene:

TRIM50

Ensembl Gene ID:

ENSAPLG00000007840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008147

364440 - 368616

4177