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Intron Name: Anas_platyrhynchos_platyrhynchos_20_366908_367225_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

366908 - 367225

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

TTGTGTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

CCTCCCACCACT

Flanking Amino Acid:

SNENQLDFIRKYSSSQFRSE

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

70.8

Major BPS

61.3

0.28

52.7

34.2

Major PPT

84.8

0.78

0.9

76.9

42.1

Minor 5ss

35.9

-1.6

2.9

43.3

43.8

Minor BPS

43.8

-0.4

2.2

62.51

Associated Gene:

Gene:

TRIM50

Ensembl Gene ID:

ENSAPLG00000007840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008147

364440 - 368616

4177