Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_3669742_3671082_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3669742 - 3671082

Intron Length:

1341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTATTGGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTTATT

Flanking Amino Acid:

YCAEIIASHWDDLRKEDFSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.9

84.4

33.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.54

45.1

Minor 5ss

37.9

-1.4

2.7

44.7

42.7

Minor BPS

63.3

0.5

1.6

79.63

36.5

Associated Gene:

Gene:

ANKFY1

Ensembl Gene ID:

ENSAPLG00000007717

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008048

3668112 - 3688112

20001