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Intron Name: Anas_platyrhynchos_platyrhynchos_20_367249_367540_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

367249 - 367540

Intron Length:

292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CATGTCTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATCAA

U12 Branch Point Sequence:

CACACATCAACT

Flanking Amino Acid:

FIRKYSSSQFRSELPSLLPG

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

57.7

0.19

1.1

Major PPT

78.8

0.65

0.9

69.3

41.4

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

48.2

-0

1.9

63.66

45.8

Associated Gene:

Gene:

TRIM50

Ensembl Gene ID:

ENSAPLG00000007840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008147

364440 - 368616

4177