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Intron Name: Anas_platyrhynchos_platyrhynchos_20_367666_367988_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

367666 - 367988

Intron Length:

323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAACC

5'SS Class:

major

3'SS Sequence:

GCTTTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGCTAT

U12 Branch Point Sequence:

TGGAGGCTGACT

Flanking Amino Acid:

WKRLHRHVLPAPEMLKLDPV

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.2

63.6

41.2

Major BPS

48.5

-0

1.4

47.8

45.7

Major PPT

86.9

0.83

0.7

84.4

30.5

Minor 5ss

39.2

-1.2

3.1

53.6

43.2

Minor BPS

38.1

-0.8

2.5

57.29

45.3

Associated Gene:

Gene:

TRIM50

Ensembl Gene ID:

ENSAPLG00000007840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008147

364440 - 368616

4177