Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_3685607_3686477_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3685607 - 3686477

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACTACT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

AGATAATAAACT

Flanking Amino Acid:

CNVDAEAFNVRGQSPMHILG

Intron Amino Acid Position:

889

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

1.1

84.4

33.5

Major BPS

70.8

0.52

70.6

31.6

Major PPT

76.6

0.6

0.7

68.6

31.8

Minor 5ss

43.9

-0.7

2.6

61.4

42.9

Minor BPS

47.2

-0.1

2.1

66.83

42.9

Associated Gene:

Gene:

ANKFY1

Ensembl Gene ID:

ENSAPLG00000007717

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008048

3668112 - 3688112

20001