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Intron Name: Anas_platyrhynchos_platyrhynchos_20_369777_370076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

369777 - 370076

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGTGGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

TTGTGCTCAATC

Flanking Amino Acid:

QGYSFLGKAGSMEELRTLSG

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

32.9

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

66.6

0.37

1.1

63.5

41.9

Minor 5ss

32.6

-2

3.4

45.9

49.3

Minor BPS

56.7

0.19

70.3

41.7

Associated Gene:

Gene:

NSUN5

Ensembl Gene ID:

ENSAPLG00000008049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024843

369017 - 382935

13919

ENSAPLT00000008344

369017 - 374075

5059