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Intron Name: Anas_platyrhynchos_platyrhynchos_20_370743_371127_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

370743 - 371127

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TCATGCTTCTCT

Flanking Amino Acid:

SHLAAILKNKGQIFAFDLDA

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.1

34.7

Major BPS

84.8

0.86

85.7

34.9

Major PPT

80.9

0.7

0.9

77.2

37.1

Minor 5ss

27.1

-2.6

2.9

24.2

36.8

Minor BPS

38.6

-0.7

3.7

68.17

48.4

Associated Gene:

Gene:

NSUN5

Ensembl Gene ID:

ENSAPLG00000008049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024843

369017 - 382935

13919

ENSAPLT00000008344

369017 - 374075

5059