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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3710826_3711860_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3710826 - 3711860

Intron Length:

1035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

ACTGCTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TCTGTTTCCACT

Flanking Amino Acid:

NLLVEPWTGDGFLTETGKTR

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.7

34.5

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

66.4

0.37

0.9

62.6

39.1

Minor 5ss

31.8

-2.1

3.3

40.1

39.9

Minor BPS

46.4

-0.2

66.64

44.9

Associated Gene:

Gene:

ZZEF1

Ensembl Gene ID:

ENSAPLG00000006501

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046130

3697619 - 3754432

56814

ENSAPLT00000040422

3697619 - 3754432

56814

ENSAPLT00000006844

3697619 - 3754432

56814