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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3716793_3717580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3716793 - 3717580

Intron Length:

788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATGAGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TTGAACTTACCA

Flanking Amino Acid:

AEELYRHLCEVVDMGDSNLM

Intron Amino Acid Position:

828

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

70.6

0.46

1.1

67.2

42.8

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

55.2

0.16

1.9

69.13

42.9

Associated Gene:

Gene:

ZZEF1

Ensembl Gene ID:

ENSAPLG00000006501

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040422

3697619 - 3754432

56814

ENSAPLT00000006844

3697619 - 3754432

56814

ENSAPLT00000046130

3697619 - 3754432

56814