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Intron Name: Anas_platyrhynchos_platyrhynchos_20_372080_373520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

372080 - 373520

Intron Length:

1441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAAGACA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTACAT

U12 Branch Point Sequence:

ACTACTACATCC

Flanking Amino Acid:

PKKRRRKKQRMLATPPPALA

Intron Amino Acid Position:

464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

65.6

Major BPS

61.4

0.28

1.1

36.5

Major PPT

1.1

0.4

13.8

Minor 5ss

31.5

-2.1

3.1

32.2

42.2

Minor BPS

41.5

-0.6

1.9

50.67

39.9

Associated Gene:

Gene:

NSUN5

Ensembl Gene ID:

ENSAPLG00000008049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008344

369017 - 374075

5059