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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3721756_3722409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3721756 - 3722409

Intron Length:

654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTGA

5'SS Class:

strong_major

3'SS Sequence:

GCAATTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

AAGTAATGAATT

Flanking Amino Acid:

EFDEKCETERRYDYLEFTDA

Intron Amino Acid Position:

1121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

1.1

38.1

Major BPS

67.7

0.44

38.9

Major PPT

70.8

0.47

64.1

41.3

Minor 5ss

45.1

-0.5

2.6

45.4

Minor BPS

46.9

-0.1

1.8

63.23

40.4

Associated Gene:

Gene:

ZZEF1

Ensembl Gene ID:

ENSAPLG00000006501

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006844

3697619 - 3754432

56814

ENSAPLT00000046130

3697619 - 3754432

56814

ENSAPLT00000040422

3697619 - 3754432

56814