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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3728179_3728743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3728179 - 3728743

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTCTTTTAATT

Flanking Amino Acid:

EASEVNPETLAKLCMQKSLL

Intron Amino Acid Position:

1405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.2

0.84

0.7

81.9

29.7

Minor 5ss

34.5

-1.8

3.3

46.4

44.2

Minor BPS

66.6

0.6

1.2

74.8

36.5

Associated Gene:

Gene:

ZZEF1

Ensembl Gene ID:

ENSAPLG00000006501

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006844

3697619 - 3754432

56814

ENSAPLT00000046130

3697619 - 3754432

56814

ENSAPLT00000040422

3697619 - 3754432

56814