Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_3732948_3733153_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3732948 - 3733153

Intron Length:

206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TCTTTCTTTACA

Flanking Amino Acid:

DMDLCKTCFLGGVKPEGHED

Intron Amino Acid Position:

1787

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

80.7

31.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

92.2

0.95

0.6

87.4

23.1

Minor 5ss

38.2

-1.3

3.1

49.9

40.6

Minor BPS

0.65

1.6

78.67

37.8

Associated Gene:

Gene:

ZZEF1

Ensembl Gene ID:

ENSAPLG00000006501

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046130

3697619 - 3754432

56814

ENSAPLT00000040422

3697619 - 3754432

56814

ENSAPLT00000006844

3697619 - 3754432

56814