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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3747725_3748599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3747725 - 3748599

Intron Length:

875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTATTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

ACGTGTTTATTT

Flanking Amino Acid:

HPYNNNTNFEDKVQIPGAIY

Intron Amino Acid Position:

2647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

82.9

0.74

0.8

80.8

36.5

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

-0.1

61.09

43.9

Associated Gene:

Gene:

ZZEF1

Ensembl Gene ID:

ENSAPLG00000006501

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040422

3697619 - 3754432

56814

ENSAPLT00000006844

3697619 - 3754432

56814

ENSAPLT00000046130

3697619 - 3754432

56814