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Intron Name: Anas_platyrhynchos_platyrhynchos_20_375757_375984_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

375757 - 375984

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGCAA

U12 Branch Point Sequence:

ACCTATGCAACC

Flanking Amino Acid:

SAFGGVGTSFGPSAASFSIG

Intron Amino Acid Position:

827

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

78.7

35.3

Major BPS

0.2

1.3

69.6

37.5

Major PPT

89.2

0.88

0.8

81.2

36.5

Minor 5ss

35.3

-1.7

3.8

52.2

Minor BPS

41.2

-0.6

2.2

49.28

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008391

374662 - 386759

12098

ENSAPLT00000048218

375662 - 386759

11098