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Intron Name: Anas_platyrhynchos_platyrhynchos_20_376114_377549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

376114 - 377549

Intron Length:

1436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

TTTGCTGAACCG

Flanking Amino Acid:

STPDTKPVFGGTPAPTFGQS

Intron Amino Acid Position:

784

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

75.7

34.4

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

82.5

0.73

0.9

73.4

41.9

Minor 5ss

27.6

-2.6

34.8

41.6

Minor BPS

40.6

-0.8

2.5

53.9

47.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048218

375662 - 386759

11098

ENSAPLT00000008391

374662 - 386759

12098