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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3776794_3778105_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3776794 - 3778105

Intron Length:

1312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGCCAGAA

5'SS Class:

weak_major

3'SS Sequence:

CCTTTGGGGCGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGCCAT

U12 Branch Point Sequence:

GCGTGGCCATCG

Flanking Amino Acid:

AHGGLLKGRSAAKGSISLQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.2

0.1

1.2

49.4

37.5

Major BPS

48.8

-0

1.5

58.2

48.3

Major PPT

45.1

-0.2

1.8

45.2

45.8

Minor 5ss

28.3

-2.5

3.4

28.8

43.6

Minor BPS

27.5

-1.8

2.3

28.44

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047571

3772853 - 3778185

5333