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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3790763_3791255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3790763 - 3791255

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTGAG

U12 Branch Point Sequence:

GGTGCTTGAGCT

Flanking Amino Acid:

YGPNELPAEEGKSLWELVLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

46.9

-0.1

1.7

47.8

Major PPT

74.7

0.56

0.8

35.5

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

48.6

-0

1.8

66.46

43.9

Associated Gene:

Gene:

ATP2A3

Ensembl Gene ID:

ENSAPLG00000004337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023557

3777552 - 3820502

42951

ENSAPLT00000004631

3777552 - 3819446

41895