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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3795080_3795448_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3795080 - 3795448

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTGCAG

U12 Branch Point Sequence:

CCTGCTGCAGCT

Flanking Amino Acid:

IANAVVGVWQERNAESAIEA

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.5

32.8

Major BPS

38.5

-0.7

1.7

47.8

Major PPT

82.1

0.72

0.8

76.6

Minor 5ss

29.5

-2.3

3.5

40.1

46.3

Minor BPS

39.1

-0.7

2.3

54.98

47.4

Associated Gene:

Gene:

ATP2A3

Ensembl Gene ID:

ENSAPLG00000004337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023557

3777552 - 3820502

42951

ENSAPLT00000004631

3777552 - 3819446

41895