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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3799958_3804991_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3799958 - 3804991

Intron Length:

5034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCCTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAC

U12 Branch Point Sequence:

CGCCGCCTAACG

Flanking Amino Acid:

LTTNQMSVCRMFIMEKVEGT

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

54.3

0.11

1.2

57.5

37.5

Major PPT

71.8

0.49

0.8

65.1

30.5

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

43.5

-0.6

2.1

46.12

Associated Gene:

Gene:

ATP2A3

Ensembl Gene ID:

ENSAPLG00000004337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023557

3777552 - 3820502

42951

ENSAPLT00000004631

3777552 - 3819446

41895