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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3805081_3806867_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3805081 - 3806867

Intron Length:

1787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTACG

5'SS Class:

major

3'SS Sequence:

TTTCCCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

GGGCTCTGAGCC

Flanking Amino Acid:

TGSTYAPEGQILKDEQPVRC

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

73.5

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

79.4

0.66

0.7

73.8

24.3

Minor 5ss

-1.9

2.7

39.5

38.8

Minor BPS

45.5

-0.3

1.6

50.35

39.6

Associated Gene:

Gene:

ATP2A3

Ensembl Gene ID:

ENSAPLG00000004337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023557

3777552 - 3820502

42951

ENSAPLT00000004631

3777552 - 3819446

41895