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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3806971_3807315_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3806971 - 3807315

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGTGGG

5'SS Class:

major

3'SS Sequence:

CCCTGCTCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCAAA

U12 Branch Point Sequence:

AAAGCTTGAGCT

Flanking Amino Acid:

CNDSSLDYNESKKVYEKVGE

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.3

43.1

Major BPS

50.3

0.01

1.2

60.3

34.2

Major PPT

70.3

0.46

0.8

61.4

35.1

Minor 5ss

25.6

-2.8

3.1

31.6

42.7

Minor BPS

47.1

-0.1

1.7

61.53

Associated Gene:

Gene:

ATP2A3

Ensembl Gene ID:

ENSAPLG00000004337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023557

3777552 - 3820502

42951

ENSAPLT00000004631

3777552 - 3819446

41895