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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3808937_3810074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3808937 - 3810074

Intron Length:

1138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGACA

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

ATCTCCTGAGCC

Flanking Amino Acid:

NSAGSKMFVKGAPESVIERC

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.3

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

75.9

0.58

0.8

73.2

31.7

Minor 5ss

31.2

-2.2

3.3

40.2

45.7

Minor BPS

59.7

0.28

1.7

69.95

41.2

Associated Gene:

Gene:

ATP2A3

Ensembl Gene ID:

ENSAPLG00000004337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023557

3777552 - 3820502

42951

ENSAPLT00000004631

3777552 - 3819446

41895