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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3810294_3810770_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3810294 - 3810770

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCAGT

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAC

U12 Branch Point Sequence:

CAGGGTTTAACG

Flanking Amino Acid:

HDSAAFVHYEPTLPFVGCVG

Intron Amino Acid Position:

589

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.7

44.5

Major BPS

71.9

0.54

1.2

75.6

36.6

Major PPT

66.9

0.38

0.7

57.1

27.1

Minor 5ss

39.7

-1.2

3.2

57.4

46.9

Minor BPS

46.9

-0.3

1.9

47.38

46.2

Associated Gene:

Gene:

ATP2A3

Ensembl Gene ID:

ENSAPLG00000004337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023557

3777552 - 3820502

42951

ENSAPLT00000004631

3777552 - 3819446

41895