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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3811107_3811176_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3811107 - 3811176

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGGCTCCGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ACCCCTTTAATT

Flanking Amino Acid:

LQSFNEITAMTGDGVNDAPA

Intron Amino Acid Position:

701

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

0.9

67.6

37.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

68.3

0.41

39.9

Minor 5ss

30.2

-2.3

2.8

Minor BPS

65.5

0.56

1.3

71.15

40.6

Associated Gene:

Gene:

ATP2A3

Ensembl Gene ID:

ENSAPLG00000004337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023557

3777552 - 3820502

42951

ENSAPLT00000004631

3777552 - 3819446

41895