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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3811398_3812075_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3811398 - 3812075

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCACC

5'SS Class:

major

3'SS Sequence:

TTTCCCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

GCTCGTCTAACT

Flanking Amino Acid:

LISSNVGEVVCIFLTAILGL

Intron Amino Acid Position:

774

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

67.6

37.6

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

79.4

0.66

0.7

73.8

24.3

Minor 5ss

35.3

-1.7

2.8

41.4

39.1

Minor BPS

47.3

-0.1

2.1

66.65

43.9

Associated Gene:

Gene:

ATP2A3

Ensembl Gene ID:

ENSAPLG00000004337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023557

3777552 - 3820502

42951

ENSAPLT00000004631

3777552 - 3819446

41895