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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3812279_3812366_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3812279 - 3812366

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTGGCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAG

U12 Branch Point Sequence:

GGGGCTGCAACT

Flanking Amino Acid:

WLFFRYLAIGVYVGLATVGA

Intron Amino Acid Position:

842

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

50.8

0.02

1.4

49.1

Major PPT

72.3

0.5

65.2

41.2

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

42.7

-0.4

2.2

57.24

45.5

Associated Gene:

Gene:

ATP2A3

Ensembl Gene ID:

ENSAPLG00000004337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023557

3777552 - 3820502

42951

ENSAPLT00000004631

3777552 - 3819446

41895