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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3812453_3812951_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3812453 - 3812951

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCGG

5'SS Class:

major

3'SS Sequence:

CCTGTGCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

AGCTTCTTACGA

Flanking Amino Acid:

EGPQVSFHQLRNFMRCTEDN

Intron Amino Acid Position:

871

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

61.4

44.7

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

66.1

0.36

1.1

60.9

40.2

Minor 5ss

28.3

-2.5

2.7

29.1

Minor BPS

48.4

-0.1

1.9

57.43

42.4

Associated Gene:

Gene:

ATP2A3

Ensembl Gene ID:

ENSAPLG00000004337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023557

3777552 - 3820502

42951

ENSAPLT00000004631

3777552 - 3819446

41895