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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3813086_3813303_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3813086 - 3813303

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGAGG

5'SS Class:

major

3'SS Sequence:

CTTGCTTTCGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

GCTTTTTGCACT

Flanking Amino Acid:

VTIEMCNALNSVSENQSLLR

Intron Amino Acid Position:

915

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

60.4

45.8

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

81.1

0.7

0.8

76.1

32.4

Minor 5ss

24.8

-2.9

3.1

30.1

43.2

Minor BPS

48.9

-0

1.9

68.54

42.7

Associated Gene:

Gene:

ATP2A3

Ensembl Gene ID:

ENSAPLG00000004337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004631

3777552 - 3819446

41895

ENSAPLT00000023557

3777552 - 3820502

42951