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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3816037_3819426_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3816037 - 3819426

Intron Length:

3390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGGGCGTC

5'SS Class:

major

3'SS Sequence:

TCCTTCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTCCTTCATT

Flanking Amino Acid:

QLKTCRTPEQGRRGQEVNDT

Intron Amino Acid Position:

1018

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.1

57.6

41.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

79.4

0.66

0.8

77.8

29.4

Minor 5ss

33.6

-1.9

3.7

40.4

46.2

Minor BPS

79.8

1.02

1.6

95.75

Associated Gene:

Gene:

ATP2A3

Ensembl Gene ID:

ENSAPLG00000004337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023557

3777552 - 3820502

42951