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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3831305_3831608_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
3831305 - 3831608

Intron Length:
304

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACGGTAA

5'SS Class:
strong_major

3'SS Sequence:
CTCTGCTCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCCCAG

U12 Branch Point Sequence:
ATGCGAGCAGCT

Flanking Amino Acid:
SKGTYSREGQGLRTGRCVNF

Intron Amino Acid Position:
143

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.1
0.73
1
72.1
35.8

Major BPS
49.3
-0
1.7
66.4
42.2

Major PPT
74.6
0.55
0.8
68.7
31.7

Minor 5ss
35
-1.7
3.4
46.3
49

Minor BPS
31.3
-1.3
2.4
49.36
43.6

Associated Gene:

Gene:
P2RX1

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3827646 - 3836034
8389